Expansions: Premiere BB (Prem-BB) 363 Physical cards published by Decipher at 1994-11-01.
Premier WB94 (Prem-WB94) 363 Physical cards published by Decipher at 1994-12-12.
Premier WB95 (Prem-WB95) 363 Physical cards published by Decipher at 1995-06.
Alternate Universe (AU) 122 Physical cards published by Decipher at 1995-11-01.
Q-Continuum (QC) 122 Physical cards published by Decipher at 1996-10-01.
First Contact (FC) 130 Physical cards published by Decipher at 1997-12-01.
Deep Space Nine (DS9) 277 Physical cards published by Decipher at 1998-07-01.
The Dominion (Dom) 134 Physical cards published by Decipher at 1999-01-01.
Blaze of Glory (BoG) 148 Physical cards published by Decipher at 1999-08-18.
Rules of Acquisition (RoA) 130 Physical cards published by Decipher at 1999-12-01.
The Trouble with Tribbles (TwT) 237 Physical cards published by Decipher at 2000-07-01.
Reflections (RFL) 105 Physical cards published by Decipher at 2000/10.
Mirror, Mirror (MM) 131 Physical cards published by Decipher at 2000-12-01.
Voyager (VOY) 218 Physical cards published by Decipher at 2001-05-23.
The Borg (Borg) 143 Physical cards published by Decipher at 2001-09-19.
Holodeck Adventures (HA) 142 Physical cards published by Decipher at 2001-12-21.
The Motion Pictures (TMP) 134 Physical cards published by Decipher at 2002-04-17.
Chain of Command (CoC) 15 Virtual cards published by The Continuing Committee at 2009-11-06.
Life From Lifelessness (LfL) 54 Virtual cards published by The Continuing Committee at 2010-06-11.
Straight and Steady (SaS) 54 Virtual cards published by The Continuing Committee at 2010-10-22.
Shades of Gray (SoG) 54 Virtual cards published by The Continuing Committee at 2011-04-15.
Resistance is Futile! (RiF) 18 Virtual cards published by The Continuing Committee at 2001-11-22.
The Next Generation (TNG) 99 Virtual cards published by The Continuing Committee at 2012-04-13.
The Next Generation: Supplemental (TNG-S) 45 Virtual cards published by The Continuing Committee at 2012-04-13.
Engage (ENG) 53 Virtual cards published by The Continuing Committee at 2012-11-02.
The Sky's the Limit (TSL) 54 Virtual cards published by The Continuing Committee at 2013-04-26.
Emissary (ES) 81 Virtual cards published by The Continuing Committee at 2013-12-06.
Emissary: Supplemental (ES-S) 80 Virtual cards published by The Continuing Committee at 2013-12-06.
The Maquis (MQ) 54 Virtual cards published by The Continuing Committee at 2014-06-27.
The Gamma Quadrant (TGQ) 54 Virtual cards published by The Continuing Committee at 2015-01-30.
20th Anniversary Collection (2AC) 18 Virtual cards published by The Continuing Committee at 2014-11-28.
Crossover (CO) 78 Virtual cards published by The Continuing Committee at 2015-09-25.
Crossover - Supplemental (CO-S) 80 Virtual cards published by The Continuing Committee at 2015-09-25.
Through the Looking Glass (TtlG) 54 Virtual cards published by The Continuing Committee at 2016-03-25.
Star Trek 50 (ST-50) 18 Virtual cards published by The Continuing Committee at 2016-09-30.
The Terran Empire (TTE) 62 Virtual cards published by The Continuing Committee at 2016-11-25.
Broken Bow (BB) 90 Virtual cards published by The Continuing Committee at 2017-03-31.
Live Long and Prosper (LlaP) 66 Virtual cards published by The Continuing Committee at 2017-09-01.
| Special sets: Promotion Cards (Promo) 7 Physical cards published by Decipher at 1994-2002.
Tournament Foils (TF) 20 Physical cards published by Decipher at 01/2001-05/2002.
Oversize Cards (OC) 4 Physical cards published by Decipher at 1997-2002.
Warp Pack (WP) 5 Physical cards published by Decipher at 1995-05-01.
Collector's Tin (Prem-SB) 363 Physical cards published by Decipher at 1995-10-18.
Two-Player Game (TPG) 27 Physical cards published by Decipher at 1997-01-01.
First Anthology (AT) 6 Physical cards published by Decipher at 1997-06-01.
The Fajo Collection (TFC) 18 Physical cards published by Decipher at 1997-12-01.
Official Tournament Sealed Deck (TSD) 20 Physical cards published by Decipher at 1998-05-01.
Away Team Pack (ATP) 2 Physical cards published by Decipher at 1998-05-01.
Premier Starter Deck 2 (PSD2-1998) 8 Physical cards published by Decipher at 1998-12-01.
Premiere Starter Deck II (PSD2-2000) 8 Physical cards published by Decipher at 2000.
Enhanced First Contact (EFC) 12 Physical cards published by Decipher at 1999-01-13.
Second Anthology (2AT) 6 Physical cards published by Decipher at 2000-03-01.
Enhanced Premiere (EP) 21 Physical cards published by Decipher at 2000-11-01.
All Good Things (AgT) 41 Physical cards published by Decipher at 2003-07-16.
The Enterprise Collection (EC) 18 Physical cards published by Decipher at 2006-07-07.
Referee Reprints (RR) 29 Virtual cards published by The Continuing Committee at 2009-11-19.
Identity Crisis (IC) 25 Virtual cards published by The Continuing Committee at 2009/11.
Homefront (HF) 36 Virtual cards published by The Continuing Committee at 2010-08-06.
BaH! (BA) 36 Virtual cards published by The Continuing Committee at 2011-03-04.
Homefront II (HF2) 54 Virtual cards published by The Continuing Committee at 2001-08-05.
Virtual Promos (VPC) 177 Virtual cards published by The Continuing Committee at 2009-2015.
Homefront III (HF3) 36 Virtual cards published by The Continuing Committee at 2012-09-07.
Homefront IV (HF4) 27 Virtual cards published by The Continuing Committee at 2013-08-23.
Homefront V (HF5) 18 Virtual cards published by The Continuing Committee at 2013-12-06.
Emissary: Warp Pack (ES-WP) 6 Virtual cards published by The Continuing Committee at 2014-04-11.
Homefront VI (HF6) 48 Virtual cards published by The Continuing Committee at 2015-05-30.
Pre-Warp Pack (PWP) 18 Virtual cards published by The Continuing Committee at 2017-06-23.
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